Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854900.1_cds_XP_016512696.1_25312
CDS Infomation

[gene=LOC107829741] [db_xref=GeneID:107829741] [protein=rop guanine nucleotide exchange factor 7-like isoform X1] [protein_id=XP_016512696.1] [location=join(1696..2263,2518..2634,2743..2897,3292..3366,3457..4197,4292..4798)] [gbkey=CDS]
Sequence

ATGGATAGACTTGTGTCACACAATGACAAAAAAGATGTCTCTTTGGAATTTCAGCCACAG
CTCAAGCATTTTATTCCACTAGAGCCTTGTACTAAATCCAAGAACCAAACCCATTTTTCT
GCATTGAAATTTAAGGTTTCAAAATCCCTTAAAAATCTTTATCATAAAGCTAAAGTCTCA
AACTTTGGTAGTAAAAGGTTTGAATTTGATGGCATTGTGATGACCAACTCTGTTTATTGT
GCTTCTCCTGGTTTTCTTGATGATAAAATGGAGGTTTTGTCTGATAATTATGGGGAAAAT
GGTGGAAAGATTCAGTCTTTAATGTGTTTGAATGAAAAGATGATAGATAGAGAGAGCTGT
TCAATTTCTGGTTTTTTGGTGTCAGAGGAAACTGTGAATGAAGAAGAAGATAGTGGGTCT
GAGGATTCATGTTCTCCTTCTTCAATTGTTTGGCATATTGAGGAGAATGAGGTCCAACAG
CACTGTGCAAATTCTGATGTTTCTGAAGAAGTAGAGAAACCTTATGTGGATAAAAGGAAA
TTAGAGAAACAAGGGTCTTGTTTGTCTGAGATTGAAATGATGAAGGAGAGATTTTCAAAA
TTGCTGTTGGGAGAAGACATGTCTGGTTGTGGAAATGGGGTTTGCACAGCACTAGCAATT
TCAAATGCTATTACTAATCTATGTGCTACTCTTTTTGGGCAAATTTGGAGATTAGAACCT
TTACCTCCAGAGAAAAAGTTAATGTGGCGTAGAGAAATGGAATGGCTTCTTTGTGTTAGT
GATCATATTGTAGAATTGATACCCTCTTGGCAAACATTTCCAGATGGAACCAAGCTTGAG
ATCATGACGTCTAGGCCGCGGTCAGACCTTTATATCAATCTTCCAGCACTTCGTAAACTC
GACAATATGCTTCTTGAGATATTAGACAGTTTCAGAAGCACAGAATTTTGGTATGTTGAG
CAAGGGATCTTAGCTCAGGAATCTGATGGGTCGTCCTCTTTCAGAAATCCTCTACCCCGT
CAAGAGGAGAAATGGTGGCTTCCCGTACCTAGAGTTCCCTCCGGTGGTCTCAGTGAAGAT
GCAAGAAGGCAATTGCAGCACAGACGTGACTGCACAAACCAAATACTGAAAGCTGCATTG
GCTATTAACAGCAACACCTTAGCGGAAATGGATGTGCCCGAGTCATATTTAGAAGGCCTT
CCTAAGGTACAGACTACAATTCTTTTAACTGATGTTTGTATACTACAATTCACACAAGGG
TTACTCATTTTGCGAGTTTTCTTATTTTTAATATTGCAGAATGGAAAAGCTAGCTTAGGT
GATCTCATCCACAAATATATCACCTCGGATCAATTTTCACCTGAATGTTTGCTGGACTGC
CTTGACTTGTCTTCTGAGCATCAAGCATTAGAGATAGCAAACCGAGTGGAGTCCTCAATT
TATGTGTGGCGCAGAAGAACTCACTCAAAACCTTTGAGTGGTGCGCATAGGTCCAATTCA
AAGTCCTCGTGGGAAATGGTTAAGGATTTGATGATTGATGGTGATAAGAGGGAGTTGCTT
GCTGATAGAGCTGAAAGCCTTTTGCTTTGCTTAAAGCAACGGTTTCCTGGTCTTCCACAG
ACAACCTTAGACATGAGTAAAATTCAATATAACAAGGATGTTGGAAAATCTATATTGGAG
AGCTACTCAAGAGTTCTTGAGAGCCTGGCATTCAATATTATTGCACGCATTGATGACCTT
CTTTATGTGGATGATTTGAATAAGCACTCGGATCAATTTGTTCCAATTTCCAAAGTCGGT
ATCATTGCTCATAAGAGCATGGGAACTCCACTCTCAGTACCTGTCAATGGCACTCCATAC
AAAACAGCTTTCACCACACCAAGCTTCTCTCCTTCCCAACTTGTTAGTCCAGCAAAGGGA
GAAAGATCAAAAATACTCGATGGGAGCAAGCTGTCCCATCGCGGGTTTGGTGTGAAAAAA
GTTTTGACTGATTATTTGAGCGTTGATTCAAAAGGGAAGGACTTCAGCAGCAGTGATTTC
AAACGATCAGATTCATTTTCAAGCACTACTCAAGATGTTTCAGCAACCGCGTCTATAGGC
TCTTCAGAATGTTCAAGAGAAATTGCCAGTCCATTGACACACGACTCGCCTGGGAAAGAA
TAA

Peptide Sequence

PEP ID

XP_016512696.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 7-like isoform X1 [Nicotiana tabacum]
Sequence

MDRLVSHNDKKDVSLEFQPQLKHFIPLEPCTKSKNQTHFSALKFKVSKSLKNLYHKAKVS
NFGSKRFEFDGIVMTNSVYCASPGFLDDKMEVLSDNYGENGGKIQSLMCLNEKMIDRESC
SISGFLVSEETVNEEEDSGSEDSCSPSSIVWHIEENEVQQHCANSDVSEEVEKPYVDKRK
LEKQGSCLSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQIWRLEP
LPPEKKLMWRREMEWLLCVSDHIVELIPSWQTFPDGTKLEIMTSRPRSDLYINLPALRKL
DNMLLEILDSFRSTEFWYVEQGILAQESDGSSSFRNPLPRQEEKWWLPVPRVPSGGLSED
ARRQLQHRRDCTNQILKAALAINSNTLAEMDVPESYLEGLPKVQTTILLTDVCILQFTQG
LLILRVFLFLILQNGKASLGDLIHKYITSDQFSPECLLDCLDLSSEHQALEIANRVESSI
YVWRRRTHSKPLSGAHRSNSKSSWEMVKDLMIDGDKRELLADRAESLLLCLKQRFPGLPQ
TTLDMSKIQYNKDVGKSILESYSRVLESLAFNIIARIDDLLYVDDLNKHSDQFVPISKVG
IIAHKSMGTPLSVPVNGTPYKTAFTTPSFSPSQLVSPAKGERSKILDGSKLSHRGFGVKK
VLTDYLSVDSKGKDFSSSDFKRSDSFSSTTQDVSATASIGSSECSREIASPLTHDSPGKE

Transcript Sequence

Gene sequence data has not been registered.